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    RAB27A RAB27A, member RAS oncogene family [ Equus caballus (horse) ]

    Gene ID: 100054867, updated on 17-Aug-2024

    Summary

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    Official Symbol
    RAB27Aprovided by VGNC
    Official Full Name
    RAB27A, member RAS oncogene familyprovided by VGNC
    Primary source
    VGNC:VGNC:22100
    See related
    Ensembl:ENSECAG00000010394
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Equus caballus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
    Orthologs
    human mouse all
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    Genomic context

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    See RAB27A in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_08 current EquCab3.0 (GCF_002863925.1) 1 NC_009144.3 (136727532..136794162)

    Chromosome 1 - NC_009144.3Genomic Context describing neighboring genes Neighboring gene cell cycle progression 1 Neighboring gene phosphatidylinositol glycan anchor biosynthesis class B Neighboring gene PIGB opposite strand 1 Neighboring gene ribosomal L24 domain containing 1 Neighboring gene small nucleolar RNA SNORA25

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_009144.3 Chromosome 1 Reference EquCab3.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in exocytosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of exocytosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in Golgi apparatus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in exocytic vesicle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in melanosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in secretory granule IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ras-related protein Rab-27A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference EquCab3.0 Primary Assembly

    Genomic

    1. NC_009144.3 Reference EquCab3.0 Primary Assembly

      Range
      136727532..136794162
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001501029.6 → XP_001501079.1  ras-related protein Rab-27A

      See identical proteins and their annotated locations for XP_001501079.1

      UniProtKB/TrEMBL
      F6SEK7
      Related
      ENSECAP00000008483.3, ENSECAT00000010924.3
      Conserved Domains (1) summary
      cd04127
      Location:6 → 185
      Rab27A; Rab GTPase family 27a (Rab27a)

    2. XM_005603040.3 → XP_005603097.1  ras-related protein Rab-27A

      See identical proteins and their annotated locations for XP_005603097.1

      UniProtKB/TrEMBL
      F6SEK7
      Conserved Domains (1) summary
      cd04127
      Location:6 → 185
      Rab27A; Rab GTPase family 27a (Rab27a)

    3. XM_023617022.1 → XP_023472790.1  ras-related protein Rab-27A

      UniProtKB/TrEMBL
      F6SEK7
      Conserved Domains (1) summary
      cd04127
      Location:6 → 185
      Rab27A; Rab GTPase family 27a (Rab27a)
    Nucleotide Protein
    Heading Accession and Version

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