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    PRXL2B peroxiredoxin like 2B [ Equus caballus (horse) ]

    Gene ID: 100054405, updated on 17-Aug-2024

    Summary

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    Official Symbol
    PRXL2Bprovided by VGNC
    Official Full Name
    peroxiredoxin like 2Bprovided by VGNC
    Primary source
    VGNC:VGNC:50795
    See related
    Ensembl:ENSECAG00000008177
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Equus caballus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
    Also known as
    FAM213B
    Orthologs
    human mouse all
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    Genomic context

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    See PRXL2B in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_08 current EquCab3.0 (GCF_002863925.1) 2 NC_009145.3 (47515566..47518818, complement)

    Chromosome 2 - NC_009145.3Genomic Context describing neighboring genes Neighboring gene tetratricopeptide repeat domain 34 Neighboring gene uncharacterized LOC111770268 Neighboring gene membrane metalloendopeptidase like 1 Neighboring gene tumor necrosis factor receptor superfamily, member 14 Neighboring gene tumor necrosis factor receptor superfamily member 14-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_009145.3 Chromosome 2 Reference EquCab3.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables prostaglandin F synthase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in prostaglandin biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    LOW QUALITY PROTEIN: prostamide/prostaglandin F synthase
    Names
    family with sequence similarity 213 member B

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference EquCab3.0 Primary Assembly

    Genomic

    1. NC_009145.3 Reference EquCab3.0 Primary Assembly

      Range
      47515566..47518818 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_023627690.1 → XP_023483458.1  LOW QUALITY PROTEIN: prostamide/prostaglandin F synthase

      Related
      ENSECAP00000006323.4, ENSECAT00000008442.4
      Conserved Domains (1) summary
      cd02970
      Location:64 → 223
      PRX_like2; Peroxiredoxin (PRX)-like 2 family; hypothetical proteins that show sequence similarity to PRXs. Members of this group contain a CXXC motif, similar to TRX. The second cysteine in the motif corresponds to the peroxidatic cysteine of PRX, however, these ...
    Nucleotide Protein
    Heading Accession and Version

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