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    CCT8 chaperonin containing TCP1 subunit 8 [ Equus caballus (horse) ]

    Gene ID: 100053750, updated on 17-Aug-2024

    Summary

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    Official Symbol
    CCT8provided by VGNC
    Official Full Name
    chaperonin containing TCP1 subunit 8provided by VGNC
    Primary source
    VGNC:VGNC:16242
    See related
    Ensembl:ENSECAG00000011457
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Equus caballus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
    Orthologs
    human mouse all
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    Genomic context

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    See CCT8 in Genome Data Viewer
    Location:
    chromosome: 26
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    RS_2024_08 current EquCab3.0 (GCF_002863925.1) 26 NC_009169.3 (26914641..26928173, complement)

    Chromosome 26 - NC_009169.3Genomic Context describing neighboring genes Neighboring gene N-6 adenine-specific DNA methyltransferase 1 Neighboring gene listerin E3 ubiquitin protein ligase 1 Neighboring gene RWD domain containing 2B Neighboring gene microRNA mir-9027 Neighboring gene ubiquitin specific peptidase 16 Neighboring gene uncharacterized LOC111770777 Neighboring gene MAP3K7 C-terminal like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_009169.3 Chromosome 26 Reference EquCab3.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP-dependent protein folding chaperone IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables unfolded protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein folding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of chaperonin-containing T-complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    T-complex protein 1 subunit theta

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference EquCab3.0 Primary Assembly

    Genomic

    1. NC_009169.3 Reference EquCab3.0 Primary Assembly

      Range
      26914641..26928173 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001499539.5 → XP_001499589.1  T-complex protein 1 subunit theta

      UniProtKB/TrEMBL
      K9K236
      Related
      ENSECAP00000009680.3, ENSECAT00000012271.4
      Conserved Domains (2) summary
      TIGR02346
      Location:10 → 539
      chap_CCT_theta; T-complex protein 1, theta subunit
      pfam00118
      Location:39 → 528
      Cpn60_TCP1; TCP-1/cpn60 chaperonin family
    Nucleotide Protein
    Heading Accession and Version

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