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    SLC1A3 solute carrier family 1 member 3 [ Equus caballus (horse) ]

    Gene ID: 100053647, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SLC1A3provided by VGNC
    Official Full Name
    solute carrier family 1 member 3provided by VGNC
    Primary source
    VGNC:VGNC:23062
    See related
    Ensembl:ENSECAG00000019371
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Equus caballus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
    Orthologs
    human mouse all
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    Genomic context

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    See SLC1A3 in Genome Data Viewer
    Location:
    chromosome: 21
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2024_08 current EquCab3.0 (GCF_002863925.1) 21 NC_009164.3 (29366647..29441560, complement)

    Chromosome 21 - NC_009164.3Genomic Context describing neighboring genes Neighboring gene NIPBL cohesin loading factor Neighboring gene MICOS complex subunit MIC27 pseudogene Neighboring gene RAN binding protein 3 like Neighboring gene NAD kinase 2, mitochondrial

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_009164.3 Chromosome 21 Reference EquCab3.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables L-glutamate transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables glutamate:sodium symporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables neutral L-amino acid transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in D-aspartate import across plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in L-aspartate import across plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in L-glutamate import across plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    excitatory amino acid transporter 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference EquCab3.0 Primary Assembly

    Genomic

    1. NC_009164.3 Reference EquCab3.0 Primary Assembly

      Range
      29366647..29441560 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_023625732.1 → XP_023481500.1  excitatory amino acid transporter 1

      UniProtKB/TrEMBL
      F7CMW1
      Related
      ENSECAP00000017208.2, ENSECAT00000020931.3
      Conserved Domains (1) summary
      pfam00375
      Location:50 → 497
      SDF; Sodium:dicarboxylate symporter family

    2. XM_001499617.6 → XP_001499667.1  excitatory amino acid transporter 1

      See identical proteins and their annotated locations for XP_001499667.1

      UniProtKB/TrEMBL
      F7CMW1
      Related
      ENSECAP00000055094.1, ENSECAT00000071319.2
      Conserved Domains (1) summary
      pfam00375
      Location:50 → 497
      SDF; Sodium:dicarboxylate symporter family
    Nucleotide Protein
    Heading Accession and Version

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