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    BEST3 bestrophin 3 [ Equus caballus (horse) ]

    Gene ID: 100052270, updated on 17-Aug-2024

    Summary

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    Official Symbol
    BEST3provided by VGNC
    Official Full Name
    bestrophin 3provided by VGNC
    Primary source
    VGNC:VGNC:15816
    See related
    Ensembl:ENSECAG00000021025
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Equus caballus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
    Orthologs
    human mouse all
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    Genomic context

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    See BEST3 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    RS_2024_08 current EquCab3.0 (GCF_002863925.1) 6 NC_009149.3 (85688526..85732556, complement)

    Chromosome 6 - NC_009149.3Genomic Context describing neighboring genes Neighboring gene chaperonin containing TCP1 subunit 2 Neighboring gene leucine rich repeat containing 10 Neighboring gene uncharacterized LOC111774092 Neighboring gene RAB3A interacting protein Neighboring gene myelin regulatory factor like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_009149.3 Chromosome 6 Reference EquCab3.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables chloride channel activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    bestrophin-3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference EquCab3.0 Primary Assembly

    Genomic

    1. NC_009149.3 Reference EquCab3.0 Primary Assembly

      Range
      85688526..85732556 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_014740994.2 → XP_014596480.1  bestrophin-3 isoform X4

      Conserved Domains (1) summary
      pfam01062
      Location:8 → 315
      Bestrophin; Bestrophin, RFP-TM, chloride channel

    2. XM_005611381.3 → XP_005611438.2  bestrophin-3 isoform X2

      Conserved Domains (1) summary
      pfam01062
      Location:8 → 297
      Bestrophin; Bestrophin, RFP-TM, chloride channel

    3. XM_001494431.4 → XP_001494481.1  bestrophin-3 isoform X1

      UniProtKB/TrEMBL
      A0A9L0TCM2
      Related
      ENSECAP00000086021.1, ENSECAT00000132798.1
      Conserved Domains (1) summary
      pfam01062
      Location:8 → 315
      Bestrophin; Bestrophin, RFP-TM, chloride channel

    4. XM_014740993.2 → XP_014596479.1  bestrophin-3 isoform X3

      UniProtKB/TrEMBL
      A0A5F5PNZ5, F6TI80
      Conserved Domains (2) summary
      pfam01062
      Location:1 → 209
      Bestrophin; Bestrophin, RFP-TM, chloride channel
      cl28033
      Location:296 → 490
      Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region

    5. XM_023643995.1 → XP_023499763.1  bestrophin-3 isoform X3

      UniProtKB/TrEMBL
      A0A5F5PNZ5, F6TI80
      Related
      ENSECAP00000018488.3, ENSECAT00000022374.3
      Conserved Domains (2) summary
      pfam01062
      Location:1 → 209
      Bestrophin; Bestrophin, RFP-TM, chloride channel
      cl28033
      Location:296 → 490
      Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region

    RNA

    1. XR_001381054.2 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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    Research Materials