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    CLIP3 CAP-Gly domain containing linker protein 3 [ Equus caballus (horse) ]

    Gene ID: 100051864, updated on 17-Aug-2024

    Summary

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    Official Symbol
    CLIP3provided by VGNC
    Official Full Name
    CAP-Gly domain containing linker protein 3provided by VGNC
    Primary source
    VGNC:VGNC:16617
    See related
    Ensembl:ENSECAG00000009105
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Equus caballus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 10
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    RS_2024_08 current EquCab3.0 (GCF_002863925.1) 10 NC_009153.3 (7275856..7288690, complement)

    Chromosome 10 - NC_009153.3Genomic Context describing neighboring genes Neighboring gene spectrin repeat containing nuclear envelope family member 4 Neighboring gene uncharacterized LOC111775187 Neighboring gene alkB homolog 6 Neighboring gene THAP domain containing 8 Neighboring gene WD repeat domain 62

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_009153.3 Chromosome 10 Reference EquCab3.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables microtubule plus-end binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cytoplasmic microtubule organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cell cortex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in microtubule plus-end IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    CAP-Gly domain-containing linker protein 3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference EquCab3.0 Primary Assembly

    Genomic

    1. NC_009153.3 Reference EquCab3.0 Primary Assembly

      Range
      7275856..7288690 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_023649606.1 → XP_023505374.1  CAP-Gly domain-containing linker protein 3 isoform X1

      UniProtKB/TrEMBL
      A0A9L0RT04, F6XIY3
      Related
      ENSECAP00000065841.1, ENSECAT00000138279.1
      Conserved Domains (3) summary
      cd00204
      Location:187 → 309
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      sd00045
      Location:195 → 232
      ANK; ANK repeat [structural motif]
      pfam01302
      Location:493 → 557
      CAP_GLY; CAP-Gly domain

    2. XM_023649607.1 → XP_023505375.1  CAP-Gly domain-containing linker protein 3 isoform X2

      UniProtKB/TrEMBL
      F6XIY3
      Conserved Domains (3) summary
      sd00045
      Location:120 → 157
      ANK; ANK repeat [structural motif]
      pfam01302
      Location:418 → 482
      CAP_GLY; CAP-Gly domain
      pfam12796
      Location:122 → 228
      Ank_2; Ankyrin repeats (3 copies)
    Nucleotide Protein
    Heading Accession and Version

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