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    RAB1A RAB1A, member RAS oncogene family [ Equus caballus (horse) ]

    Gene ID: 100051331, updated on 17-Aug-2024

    Summary

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    Official Symbol
    RAB1Aprovided by VGNC
    Official Full Name
    RAB1A, member RAS oncogene familyprovided by VGNC
    Primary source
    VGNC:VGNC:22093
    See related
    Ensembl:ENSECAG00000009926
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Equus caballus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
    Orthologs
    human mouse all
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    Genomic context

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    See RAB1A in Genome Data Viewer
    Location:
    chromosome: 15
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_08 current EquCab3.0 (GCF_002863925.1) 15 NC_009158.3 (37659599..37687654)

    Chromosome 15 - NC_009158.3Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111768081 Neighboring gene uncharacterized LOC111768082 Neighboring gene centrosomal protein 68 Neighboring gene solute carrier family 1 member 4

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_009158.3 Chromosome 15 Reference EquCab3.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ras-related protein Rab-1A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference EquCab3.0 Primary Assembly

    Genomic

    1. NC_009158.3 Reference EquCab3.0 Primary Assembly

      Range
      37659599..37687654
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001493297.5 → XP_001493347.1  ras-related protein Rab-1A

      See identical proteins and their annotated locations for XP_001493347.1

      UniProtKB/TrEMBL
      A0A9L0T4E3
      Related
      ENSECAP00000023502.2, ENSECAT00000043241.3
      Conserved Domains (1) summary
      cd01869
      Location:10 → 175
      Rab1_Ypt1; Rab GTPase family 1 includes the yeast homolog Ypt1
    Nucleotide Protein
    Heading Accession and Version

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