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    ST6GALNAC2 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 2 [ Equus caballus (horse) ]

    Gene ID: 100050960, updated on 17-Aug-2024

    Summary

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    Official Symbol
    ST6GALNAC2provided by VGNC
    Official Full Name
    ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 2provided by VGNC
    Primary source
    VGNC:VGNC:110541
    See related
    Ensembl:ENSECAG00000016019
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Equus caballus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
    Orthologs
    human mouse all
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    Genomic context

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    See ST6GALNAC2 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2024_08 current EquCab3.0 (GCF_002863925.1) 11 NC_009154.3 (5595858..5611548)

    Chromosome 11 - NC_009154.3Genomic Context describing neighboring genes Neighboring gene ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 1 Neighboring gene uncharacterized LOC102151101 Neighboring gene uncharacterized LOC111775582 Neighboring gene uncharacterized LOC100629536 Neighboring gene small nucleolar RNA R38 Neighboring gene small nucleolar RNA R38

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_009154.3 Chromosome 11 Reference EquCab3.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein O-linked glycosylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference EquCab3.0 Primary Assembly

    Genomic

    1. NC_009154.3 Reference EquCab3.0 Primary Assembly

      Range
      5595858..5611548
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_023651961.1 → XP_023507729.1  alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2 isoform X1

      UniProtKB/TrEMBL
      A0A3Q2KU54
      Related
      ENSECAP00000038123.2, ENSECAT00000061236.2
      Conserved Domains (1) summary
      pfam00777
      Location:112 → 373
      Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

    2. XM_023651962.1 → XP_023507730.1  alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2 isoform X2

      Conserved Domains (1) summary
      pfam00777
      Location:112 → 345
      Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

    RNA

    1. XR_002811324.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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