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    SLC38A1 solute carrier family 38 member 1 [ Equus caballus (horse) ]

    Gene ID: 100050256, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SLC38A1provided by VGNC
    Official Full Name
    solute carrier family 38 member 1provided by VGNC
    Primary source
    VGNC:VGNC:23188
    See related
    Ensembl:ENSECAG00000007576
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Equus caballus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
    Orthologs
    human mouse all
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    Genomic context

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    See SLC38A1 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    20
    Annotation release Status Assembly Chr Location
    RS_2024_08 current EquCab3.0 (GCF_002863925.1) 6 NC_009149.3 (65137242..65206165, complement)

    Chromosome 6 - NC_009149.3Genomic Context describing neighboring genes Neighboring gene SR-related CTD associated factor 11 Neighboring gene 60S ribosomal protein L13a pseudogene Neighboring gene uncharacterized LOC111773803 Neighboring gene solute carrier family 38 member 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_009149.3 Chromosome 6 Reference EquCab3.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables L-glutamine transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in amino acid transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in glutamine transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    sodium-coupled neutral amino acid symporter 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference EquCab3.0 Primary Assembly

    Genomic

    1. NC_009149.3 Reference EquCab3.0 Primary Assembly

      Range
      65137242..65206165 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_014740928.2 → XP_014596414.2  sodium-coupled neutral amino acid symporter 1

      UniProtKB/TrEMBL
      A0A9L0S122, F6UNS2
      Conserved Domains (1) summary
      cl00456
      Location:69 → 473
      SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain

    2. XM_014740929.2 → XP_014596415.2  sodium-coupled neutral amino acid symporter 1

      UniProtKB/TrEMBL
      A0A9L0S122, F6UNS2
      Related
      ENSECAP00000067739.1, ENSECAT00000104512.1
      Conserved Domains (1) summary
      cl00456
      Location:69 → 473
      SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain

    3. XM_014740930.2 → XP_014596416.2  sodium-coupled neutral amino acid symporter 1

      UniProtKB/TrEMBL
      A0A9L0S122, F6UNS2
      Conserved Domains (1) summary
      cl00456
      Location:69 → 473
      SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain

    4. XM_014740931.2 → XP_014596417.2  sodium-coupled neutral amino acid symporter 1

      UniProtKB/TrEMBL
      A0A9L0S122, F6UNS2
      Conserved Domains (1) summary
      cl00456
      Location:69 → 473
      SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain
    Nucleotide Protein
    Heading Accession and Version

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