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    ST3GAL4 ST3 beta-galactoside alpha-2,3-sialyltransferase 4 [ Oryctolagus cuniculus (rabbit) ]

    Gene ID: 100008715, updated on 8-Mar-2024

    Summary

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    Gene symbol
    ST3GAL4
    Gene description
    ST3 beta-galactoside alpha-2,3-sialyltransferase 4
    See related
    Ensembl:ENSOCUG00000012528
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Oryctolagus cuniculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus
    Orthologs
    human mouse all
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    Genomic context

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    See ST3GAL4 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    RS_2023_02 current UM_NZW_1.0 (GCF_009806435.1) 1 NC_067374.1 (104658572..104690877, complement)

    Chromosome 1 - NC_067374.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC127484933 Neighboring gene kirre like nephrin family adhesion molecule 3 Neighboring gene decapping enzyme, scavenger Neighboring gene TIR domain containing adaptor protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_067374.1 Chromosome 1 Reference UM_NZW_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables sialyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in glycolipid biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein glycosylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4
    Names
    alpha-2,3-sialyltransferase
    NP_001075520.1
    XP_008256623.1
    XP_017196790.1
    XP_017197076.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001082051.1 → NP_001075520.1  CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4 precursor

      See identical proteins and their annotated locations for NP_001075520.1

      Status: PROVISIONAL

      Source sequence(s)
      AF121967
      UniProtKB/TrEMBL
      A0A5F9D7G4, Q9N257
      Related
      ENSOCUP00000042139.1, ENSOCUT00000057728.1
      Conserved Domains (1) summary
      pfam00777
      Location:83 → 330
      Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

    RefSeqs of Annotated Genomes: GCF_009806435.1-RS_2023_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UM_NZW_1.0 Primary Assembly

    Genomic

    1. NC_067374.1 Reference UM_NZW_1.0 Primary Assembly

      Range
      104658572..104690877 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_008258401.3 → XP_008256623.1  CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4 isoform X3

      UniProtKB/TrEMBL
      A0A5F9D7G4
      Conserved Domains (1) summary
      pfam00777
      Location:84 → 331
      Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

    2. XM_017341587.2 → XP_017197076.1  CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4 isoform X2

      UniProtKB/TrEMBL
      A0A5F9D7G4

    3. XM_017341301.2 → XP_017196790.1  CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4 isoform X1

      UniProtKB/TrEMBL
      A0A5F9D7G4
    Nucleotide Protein
    Heading Accession and Version

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