mtnr1c melatonin receptor 1C [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: mtnr1cprovided by ZNC
Official Full Name: melatonin receptor 1Cprovided by ZNC
Primary source: ZFIN:ZDB-GENE-990415-158
See related: Ensembl:ENSDARG00000035609 AllianceGenome:ZFIN:ZDB-GENE-990415-158
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: mel1c
Summary: Predicted to enable melatonin receptor activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in plasma membrane. Is expressed in male organism. [provided by Alliance of Genome Resources, Oct 2024]
Orthologs: all
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Genomic context

Location:: chromosome: 5

Exon count:: 2

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	5	NC_007116.7 (22633188..22665856)
105	previous assembly	GRCz10 (GCF_000002035.5)	5	NC_007116.6 (22129388..22162056)

Chromosome 5 - NC_007116.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables G protein-coupled receptor activity	IEA Inferred from Electronic Annotation more info
enables melatonin receptor activity	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within G protein-coupled receptor signaling pathway	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within signal transduction	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in membrane	IEA Inferred from Electronic Annotation more info
located_in plasma membrane	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: melatonin receptor type 1C

Names: mel-1C-R; mel1C receptor; melatonin receptor Mel1C Z2.3; melatonin receptor type 1C Z2.3

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001161484.1 → NP_001154956.1 melatonin receptor type 1C

Status: PROVISIONAL

Source sequence(s)

BX511098

UniProtKB/TrEMBL

A0A8M1NRM8, A2BGT9

Related

ENSDARP00000106863.2, ENSDART00000128781.3

Conserved Domains (2) summary

pfam00001
Location:48 → 297

7tm_1; 7 transmembrane receptor (rhodopsin family)

cl21561
Location:39 → 186

7tm_4; Olfactory receptor