U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    LOC7498118 trans-cinnamate 4-monooxygenase [ Populus trichocarpa (black cottonwood) ]

    Gene ID: 7498118, updated on 23-Nov-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC7498118
    Gene description
    trans-cinnamate 4-monooxygenase
    Locus tag
    POPTR_019G130700v4
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Populus trichocarpa
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
    Also known as
    C4H1
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC7498118 in Genome Data Viewer
    Location:
    chromosome: 19
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    102 current P.trichocarpa_v4.1 (GCF_000002775.5) 19 NC_037303.2 (15316437..15319576, complement)
    101 previous assembly Pop_tri_v3 (GCF_000002775.4) 19 NC_037303.1 (15646178..15649329, complement)

    Chromosome 19 - NC_037303.2Genomic Context describing neighboring genes Neighboring gene probable glutathione S-transferase parA Neighboring gene small nucleolar RNA snoR100 Neighboring gene ATP-dependent RNA helicase DBP2 Neighboring gene uncharacterized LOC112325301 Neighboring gene protein NETWORKED 4B

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Towards a systems approach for lignin biosynthesis in Populus trichocarpa: transcript abundance and specificity of the monolignol biosynthetic genes. Shi R, et al. Plant Cell Physiol, 2010 Jan. PMID 19996151

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables heme binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables iron ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables trans-cinnamate 4-monooxygenase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in lignin metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    trans-cinnamate 4-monooxygenase
    Names
    cinnamate 4-hydroxylase
    trans-cinnamate 4-hydroxylase

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Populus trichocarpa Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference P.trichocarpa_v4.1 Primary Assembly

    Genomic

    1. NC_037303.2 Reference P.trichocarpa_v4.1 Primary Assembly

      Range
      15316437..15319576 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002325602.4 → XP_002325638.1  trans-cinnamate 4-monooxygenase

      See identical proteins and their annotated locations for XP_002325638.1

      UniProtKB/TrEMBL
      B2Z6P4, B2Z6P6
      Conserved Domains (1) summary
      PLN02394
      Location:12 → 505
      PLN02394; trans-cinnamate 4-monooxygenase
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials