U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    CES5AP1 carboxylesterase 5A pseudogene 1 [ Homo sapiens (human) ]

    Gene ID: 649264, updated on 17-Sep-2024

    Summary

    Official Symbol
    CES5AP1provided by HGNC
    Official Full Name
    carboxylesterase 5A pseudogene 1provided by HGNC
    Primary source
    HGNC:HGNC:38516
    See related
    AllianceGenome:HGNC:38516
    Gene type
    pseudo
    RefSeq status
    PROVISIONAL
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Biased expression in prostate (RPKM 1.8), ovary (RPKM 1.0) and 1 other tissue See more
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See CES5AP1 in Genome Data Viewer
    Location:
    22q11.23
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 22 NC_000022.11 (23359606..23382126, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 22 NC_060946.1 (23782480..23805063, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 22 NC_000022.10 (23701793..23724313, complement)

    Chromosome 22 - NC_000022.11Genomic Context describing neighboring genes Neighboring gene ribosomal protein S10 pseudogene 30 Neighboring gene long intergenic non-protein coding RNA 2556 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr22:23709276-23710010 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:23728238-23729220 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:23730785-23731642 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:23735088-23735588 Neighboring gene ZDHHC8B, pseudogene Neighboring gene coiled-coil domain containing 188B, pseudogene Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:23741087-23741641 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:23741731-23742504 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:23758527-23759161 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr22:23773427-23774272 Neighboring gene long intergenic non-protein coding RNA 1659

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_037839.1 RNA Sequence

      Status: PROVISIONAL

      Source sequence(s)
      AP000344, BU585270, BX280446

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000022.11 Reference GRCh38.p14 Primary Assembly

      Range
      23359606..23382126 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCh38.p14 ALT_REF_LOCI_1

    Genomic

    1. NT_187632.1 Reference GRCh38.p14 ALT_REF_LOCI_1

      Range
      5564..28084 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060946.1 Alternate T2T-CHM13v2.0

      Range
      23782480..23805063 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)