U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    yiiD putative acetyltransferase [ Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 ]

    Gene ID: 1255555, updated on 6-Oct-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    yiiD
    Gene description
    putative acetyltransferase
    Locus tag
    STM4029
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 (strain: LT2, serovar: Typhimurium, sub-species: enterica, culture-collection: ATCC:700720, culture-collection: SGSC:1412, type-material: type strain of Salmonella enterica)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Sequence:
    NC_003197.2 (4238646..4239647)

    NC_003197.2Genomic Context describing neighboring genes Neighboring gene putative glycerol-3-phosphate regulon repressor Neighboring gene putative enzyme Neighboring gene tRNA processing exoribonuclease BN Neighboring gene D-Tyr-tRNA(Tyr) deacylase Neighboring gene putative cytoplasmic protein Neighboring gene putative cytoplasmic protein Neighboring gene putative acetyl esterase

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003197.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Complete genome sequence of Salmonella enterica serovar Typhimurium LT2. McClelland M, et al. Nature, 2001 Oct 25. PMID 11677609

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    regulatory

    • Loc: 4238646-4238651 regulatory_class = ribosome_binding_site

    General protein information

    Go to the top of the page Help
    Preferred Names
    putative acetyltransferase
    NP_462909.1
    • similar to E. coli putative acetyltransferase (AAD13450.1); Blastp hit to AAD13450.1 (329 aa), 93% identity in aa 1 - 329

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003197.2 Reference assembly

      Range
      4238646..4239647
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_462909.1 putative acetyltransferase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]

      See identical proteins and their annotated locations for NP_462909.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A2C9P5S0, A0A3G3E6F0, A0A3Y2FS53, A0A402UHE4, A0A5H9H9B2, A0A5I5V2J7, A0A5J0C5H6, A0A5U2EB15, A0A5U9I6W1, A0A5W2AD88, A0A5W7RTF3, A0A5Z5I2Q5, A0A609NTN8, A0A624VXK1, A0A627U7K2, A0A6Y1L0E4, A0A7Z1HUS8
      Conserved Domains (2) summary
      pfam00583
      Location:29 → 138
      Acetyltransf_1; Acetyltransferase (GNAT) family
      pfam09500
      Location:174 → 314
      YiiD_C; Putative thioesterase (yiiD_Cterm)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.