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    ssaE secretion system effector [ Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 ]

    Gene ID: 1252914, updated on 6-Oct-2023

    Summary

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    Gene symbol
    ssaE
    Gene description
    secretion system effector
    Locus tag
    STM1396
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 (strain: LT2, serovar: Typhimurium, sub-species: enterica, culture-collection: ATCC:700720, culture-collection: SGSC:1412, type-material: type strain of Salmonella enterica)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella
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    Genomic context

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    Sequence:
    NC_003197.2 (1483080..1483328)

    NC_003197.2Genomic Context describing neighboring genes Neighboring gene secretion system apparatus protein Neighboring gene secretion system apparatus protein Neighboring gene secretion system apparatus protein Neighboring gene secretion system effector Neighboring gene secretion system effector Neighboring gene secretion system chaparone

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003197.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Complete genome sequence of Salmonella enterica serovar Typhimurium LT2. McClelland M, et al. Nature, 2001 Oct 25. PMID 11677609

    GeneRIFs: Gene References Into Functions

    General gene information

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    regulatory

    • Loc: 1483080-1483085 regulatory_class = ribosome_binding_site

    General protein information

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    Preferred Names
    secretion system effector
    NP_460361.1
    • putative secretory apparatus component (gi|3377860)

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003197.2 Reference assembly

      Range
      1483080..1483328
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_460361.1 secretion system effector [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]

      See identical proteins and their annotated locations for NP_460361.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A3Y2UIX7, A0A3Z2NVR6, A0A624MBP0, A0A6Y0QS05, A0A705HGX9, A0A736I0A3
      Conserved Domains (1) summary
      PRK15366
      Location:1 → 80
      PRK15366; type III secretion system chaperone SsaE; Provisional
    Nucleotide Protein
    Heading Accession and Version

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