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spvD putative transposase [ Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 ]

Gene ID: 1256204, updated on 6-Oct-2023

Summary

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Gene symbol
spvD
Gene description
putative transposase
Locus tag
PSLT035
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 (strain: LT2, serovar: Typhimurium, sub-species: enterica, culture-collection: SGSC:1412, type-material: type strain of Salmonella enterica)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella
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Genomic context

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Location:
plasmid: pSLT
Sequence:
NC_003277.2 (25309..25659, complement)

NC_003277.2Genomic Context describing neighboring genes Neighboring gene putative inner membrane protein Neighboring gene putative adhesin Neighboring gene putative transposase, IS200-like Neighboring gene Salmonella plasmid virulence: hydrophilic protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003277.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Complete genome sequence of Salmonella enterica serovar Typhimurium LT2. McClelland M, et al. Nature, 2001 Oct 25. PMID 11677609

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
putative transposase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003277.2 Reference assembly

    Range
    25309..25659 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_490525.1 putative transposase (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A3Y0UBS1, A0A5W0X9T9, A0A5X9YMB0, A0A5Z8NLT7, A0A603V8B8, A0A739LIA2, A0A747MBU6
    Conserved Domains (2) summary
    COG0675
    Location:1 → 111
    InsQ; Transposase [Mobilome: prophages, transposons]
    pfam12323
    Location:1 → 45
    HTH_OrfB_IS605; Helix-turn-helix domain
Nucleotide Protein
Heading Accession and Version

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