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    TMEM35B transmembrane protein 35B [ Homo sapiens (human) ]

    Gene ID: 100506144, updated on 27-Aug-2024

    Summary

    Official Symbol
    TMEM35Bprovided by HGNC
    Official Full Name
    transmembrane protein 35Bprovided by HGNC
    Primary source
    HGNC:HGNC:40021
    See related
    Ensembl:ENSG00000243749 AllianceGenome:HGNC:40021
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    ZMYM6NB
    Summary
    Predicted to be integral component of membrane. [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Ubiquitous expression in placenta (RPKM 28.9), thyroid (RPKM 23.1) and 25 other tissues See more
    Orthologs
    NEW
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    Genomic context

    Location:
    1p34.3
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (34981380..34985347, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (34844050..34848018, complement)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (35446981..35450948, complement)

    Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 629 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 718 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 719 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 720 Neighboring gene DLG associated protein 3 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:35350327-35351322 Neighboring gene MPRA-validated peak171 silencer Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 631 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 632 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 634 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 633 Neighboring gene G protein-coupled receptor 199, pseudogene Neighboring gene ReSE screen-validated silencer GRCh37_chr1:35462847-35463058 Neighboring gene zinc finger MYM-type containing 6 Neighboring gene H3K27ac hESC enhancer GRCh37_chr1:35496848-35497374 Neighboring gene H3K27ac hESC enhancer GRCh37_chr1:35497375-35497899 Neighboring gene uncharacterized LOC124903990

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General protein information

    Preferred Names
    transmembrane protein 35B
    Names
    ZMYM6 neighbor protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001195156.2NP_001182085.1  transmembrane protein 35B precursor

      See identical proteins and their annotated locations for NP_001182085.1

      Status: VALIDATED

      Source sequence(s)
      AC114490
      Consensus CDS
      CCDS53296.1
      UniProtKB/Swiss-Prot
      Q8NCS4
      Related
      ENSP00000362435.3, ENST00000373337.4

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

      Range
      34981380..34985347 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060925.1 Alternate T2T-CHM13v2.0

      Range
      34844050..34848018 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)