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    BDBG_00011 ribulose-phosphate 3-epimerase [ Blastomyces gilchristii SLH14081 ]

    Gene ID: 8507608, updated on 31-Oct-2024

    Summary

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    Gene symbol
    BDBG_00011
    Gene description
    ribulose-phosphate 3-epimerase
    Locus tag
    BDBG_00011
    See related
    FungiDB:BDBG_00011; VEuPathDB:BDBG_00011
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Blastomyces gilchristii SLH14081 (strain: SLH14081)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Onygenales; Ajellomycetaceae; Blastomyces
    Orthologs
    Aspergillus fumigatus all
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    Genomic context

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    See BDBG_00011 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    3

    NW_003101682.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene hypothetical protein;uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_003101682.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables D-ribulose-phosphate 3-epimerase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in carbohydrate metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in pentose-phosphate shunt IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in pentose-phosphate shunt, non-oxidative branch IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ribulose-phosphate 3-epimerase

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_003101682.1 Reference assembly

      Range
      210503..213711
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_031719688.1 → XP_031575552.1  ribulose-phosphate 3-epimerase [Blastomyces gilchristii SLH14081]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A179U626
      Conserved Domains (1) summary
      cl21457
      Location:5 → 247
      TIM; TIM-like beta/alpha barrel domains
    Nucleotide Protein
    Heading Accession and Version

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