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    Serine/threonine-protein kinase Rio1 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 833709, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Serine/threonine-protein kinase Rio1
    Primary source
    TAIR:AT5G37350
    Locus tag
    AT5G37350
    See related
    Araport:AT5G37350
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MNJ8.10; MNJ8_10
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    12
    Sequence:
    Chromosome: 5; NC_003076.8 (14792819..14796045)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene ZPR1 zinc-finger domain protein Neighboring gene miscRNA Neighboring gene LOW protein: ammonium transporter 1-like protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_123094.2
    NM_180769.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein serine/threonine kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Serine/threonine-protein kinase Rio1
    NP_568548.2
    • Serine/threonine-protein kinase Rio1; FUNCTIONS IN: protein serine/threonine kinase activity, catalytic activity, ATP binding; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: RIO-like kinase (InterPro:IPR018934), RIO kinase, conserved site (InterPro:IPR018935), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Serine/threonine-protein kinase Rio1 (TAIR:AT2G24990.1); Has 12052 Blast hits to 6663 proteins in 769 species: Archae - 380; Bacteria - 822; Metazoa - 4616; Fungi - 1157; Plants - 579; Viruses - 131; Other Eukaryotes - 4367 (source: NCBI BLink).
    NP_851100.1
    • Serine/threonine-protein kinase Rio1; FUNCTIONS IN: protein serine/threonine kinase activity, catalytic activity, ATP binding; CONTAINS InterPro DOMAIN/s: RIO-like kinase (InterPro:IPR018934), Serine/threonine-protein kinase Rio1 (InterPro:IPR017407), RIO kinase (InterPro:IPR000687), RIO kinase, conserved site (InterPro:IPR018935), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Serine/threonine-protein kinase Rio1 (TAIR:AT2G24990.1); Has 12159 Blast hits to 6760 proteins in 774 species: Archae - 403; Bacteria - 825; Metazoa - 4615; Fungi - 1188; Plants - 588; Viruses - 131; Other Eukaryotes - 4409 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      14792819..14796045
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_180769.3 → NP_851100.1  Serine/threonine-protein kinase Rio1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_851100.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q67YW7, Q9FHT0
      Conserved Domains (2) summary
      COG1718
      Location:124 → 395
      RIO1; Serine/threonine-protein kinase RIO1 [Signal transduction mechanisms]
      cd05147
      Location:166 → 355
      RIO1_euk; Catalytic domain of the atypical protein serine kinase, Eukaryotic RIO1 kinase

    2. NM_123094.2 → NP_568548.2  Serine/threonine-protein kinase Rio1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_568548.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4K748
      Conserved Domains (2) summary
      COG1718
      Location:30 → 249
      RIO1; Serine/threonine-protein kinase RIO1 [Signal transduction mechanisms]
      cd05147
      Location:30 → 209
      RIO1_euk; Catalytic domain of the atypical protein serine kinase, Eukaryotic RIO1 kinase
    Nucleotide Protein
    Heading Accession and Version

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