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    Rho GTPase activating protein with PAK-box/P21-Rho-binding domain-containing protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 832301, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Rho GTPase activating protein with PAK-box/P21-Rho-binding domain-containing protein
    Primary source
    TAIR:AT5G22400
    Locus tag
    AT5G22400
    See related
    Araport:AT5G22400
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MWD9.20; MWD9_20
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    5
    Sequence:
    Chromosome: 5; NC_003076.8 (7422670..7425574, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene FANTASTIC four-like protein (DUF3049) Neighboring gene ncRNA Neighboring gene root hair specific 18 Neighboring gene fatty acid reductase 7

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_122145.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Rho GTPase activating protein with PAK-box/P21-Rho-binding domain-containing protein
    NP_197632.1
    • Rho GTPase activating protein with PAK-box/P21-Rho-binding domain; FUNCTIONS IN: Rac GTPase activator activity; INVOLVED IN: signal transduction; LOCATED IN: intracellular, chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: PAK-box/P21-Rho-binding (InterPro:IPR000095), Rho GTPase activation protein (InterPro:IPR008936), RhoGAP (InterPro:IPR000198); BEST Arabidopsis thaliana protein match is: rac GTPase activating protein (TAIR:AT3G11490.1); Has 3977 Blast hits to 3976 proteins in 184 species: Archae - 0; Bacteria - 0; Metazoa - 2927; Fungi - 443; Plants - 206; Viruses - 0; Other Eukaryotes - 401 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      7422670..7425574 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_122145.5 → NP_197632.1  Rho GTPase activating protein with PAK-box/P21-Rho-binding domain-containing protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_197632.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9FMR1
      UniProtKB/TrEMBL
      A0A178UPX4
      Conserved Domains (2) summary
      smart00324
      Location:178 → 337
      RhoGAP; GTPase-activator protein for Rho-like GTPases
      cd00132
      Location:115 → 155
      CRIB; PAK (p21 activated kinase) Binding Domain (PBD), binds Cdc42p- and/or Rho-like small GTPases; also known as the Cdc42/Rac interactive binding (CRIB) motif; has been shown to inhibit transcriptional activation and cell transformation mediated by the ...
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9FMR1.1

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