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    UPS3 ureide permease 3 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 814889, updated on 6-Oct-2023

    Summary

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    Gene symbol
    UPS3
    Gene description
    ureide permease 3
    Primary source
    Araport:AT2G03600
    Locus tag
    AT2G03600
    See related
    TAIR:AT2G03600
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATUPS3; F19B11.5; F19B11_5; ureide permease 3
    Summary
    Encodes UPS3 (ureide permease 3), similar to UPS1, an allantoin transporter.
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    Genomic context

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    See UPS3 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    7
    Sequence:
    Chromosome: 2; NC_003071.7 (1096984..1098826)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene F-box family protein-like protein Neighboring gene ureide permease 1 Neighboring gene F-box family protein Neighboring gene magnesium transporter 3 Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_001124786.2
    NM_001202576.1
    NM_001202577.1
    NM_126410.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in nitrogen compound transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    ureide permease 3
    NP_001118257.1
    • ureide permease 3 (UPS3); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: ureide permease 1 (TAIR:AT2G03590.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    NP_001118258.1
    • ureide permease 3 (UPS3); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: ureide permease 1 (TAIR:AT2G03590.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    NP_001189505.1
    • ureide permease 3 (UPS3); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: ureide permease 1 (TAIR:AT2G03590.1).
    NP_001189506.1
    • ureide permease 3 (UPS3); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: ureide permease 1 (TAIR:AT2G03590.1).
    NP_178458.2
    • ureide permease 3 (UPS3); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: ureide permease 1 (TAIR:AT2G03590.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      1096984..1098826
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001335193.1 → NP_001324264.1  ureide permease 3 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9ZPR6

    2. NM_001124785.1 → NP_001118257.1  ureide permease 3 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001118257.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      B3H4C7
      Conserved Domains (1) summary
      pfam07168
      Location:41 → 276
      Ureide_permease; Ureide permease

    3. NM_001124786.2 → NP_001118258.1  ureide permease 3 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001118258.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4IT91
      Conserved Domains (1) summary
      pfam07168
      Location:1 → 171
      Ureide_permease; Ureide permease

    4. NM_001202577.1 → NP_001189506.1  ureide permease 3 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001189506.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q1PFA0, Q9ZPR6
      UniProtKB/TrEMBL
      F4IT87
      Conserved Domains (1) summary
      pfam07168
      Location:41 → 325
      Ureide_permease; Ureide permease

    5. NM_001202576.1 → NP_001189505.1  ureide permease 3 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001189505.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q1PFA0, Q9ZPR6
      UniProtKB/TrEMBL
      F4IT88
      Conserved Domains (1) summary
      pfam07168
      Location:41 → 317
      Ureide_permease; Ureide permease

    6. NM_126410.2 → NP_178458.2  ureide permease 3 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_178458.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9ZPR6
      Conserved Domains (1) summary
      pfam07168
      Location:41 → 253
      Ureide_permease; Ureide permease
    Nucleotide Protein
    Heading Accession and Version

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