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    [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 6241025, updated on 11-Sep-2024

    Summary

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    Primary source
    TAIR:AT1G69572
    Locus tag
    AT1G69572
    See related
    Araport:AT1G69572
    Gene type
    ncRNA
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Summary
    Natural antisense transcript overlaps with AT1G69570~Potential natural antisense gene, locus overlaps with AT1G69570
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    2
    Sequence:
    Chromosome: 1; NC_003070.9 (26161551..26162791)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene miscRNA Neighboring gene myb domain protein 105 Neighboring gene Dof-type zinc finger DNA-binding family protein Neighboring gene Homeodomain-like superfamily protein Neighboring gene ncRNA Neighboring gene CLAVATA3/ESR-RELATED 45

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The antiphasic regulatory module comprising CDF5 and its antisense RNA FLORE links the circadian clock to photoperiodic flowering. Henriques R, et al. New Phytol, 2017 Nov. PMID 28758689

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within positive regulation of long-day photoperiodism, flowering IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within positive regulation of short-day photoperiodism, flowering IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      26161551..26162791
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. NR_139917.1 RNA Sequence

      Status: REVIEWED

    2. NR_139918.1 RNA Sequence

      Status: REVIEWED

    3. NR_139919.1 RNA Sequence

      Status: REVIEWED

    Gene LinkOut

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