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    YUC11 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 838741, updated on 22-Aug-2024

    Summary

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    Official Symbol
    YUC11
    Primary source
    TAIR:AT1G21430
    Locus tag
    AT1G21430
    See related
    Araport:AT1G21430
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F24J8.6; F24J8_6
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    3
    Sequence:
    Chromosome: 1; NC_003070.9 (7500845..7502186)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene F-box/RNI-like superfamily protein Neighboring gene tRNA-Gln Neighboring gene Phosphoenolpyruvate carboxylase family protein Neighboring gene SCARECROW-like 1 Neighboring gene Nodulin MtN3 family protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Auxin synthesized by the YUCCA flavin monooxygenases is essential for embryogenesis and leaf formation in Arabidopsis. Cheng Y, et al. Plant Cell, 2007 Aug. PMID 17704214, Free PMC Article
    2. Activation-tagged suppressors of a weak brassinosteroid receptor mutant. Kang B, et al. Mol Plant, 2010 Jan. PMID 19995721, Free PMC Article
    3. An Improved Recombineering Toolset for Plants. Brumos J, et al. Plant Cell, 2020 Jan. PMID 31666295, Free PMC Article
    4. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_101994.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables N,N-dimethylaniline monooxygenase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables NADP binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables flavin adenine dinucleotide binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables indole-3-pyruvate monooxygenase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in auxin biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within regulation of anatomical structure morphogenesis IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    acts_upstream_of_or_within response to ethylene IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Flavin-binding monooxygenase family protein
    NP_173564.1
    • YUC11; FUNCTIONS IN: NADP or NADPH binding, oxidoreductase activity, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity; INVOLVED IN: regulation of anatomical structure morphogenesis; LOCATED IN: membrane; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: Flavin-containing monooxygenase family protein (TAIR:AT1G48910.1); Has 9762 Blast hits to 9749 proteins in 1331 species: Archae - 35; Bacteria - 5524; Metazoa - 772; Fungi - 1287; Plants - 602; Viruses - 0; Other Eukaryotes - 1542 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      7500845..7502186
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_101994.1 → NP_173564.1  Flavin-binding monooxygenase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_173564.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9LPL3
      UniProtKB/TrEMBL
      A0A5S9VG74
      Conserved Domains (2) summary
      TIGR04046
      Location:9 → 376
      MSMEG_0569_nitr; flavin-dependent oxidoreductase, MSMEG_0569 family
      cl21454
      Location:10 → 212
      NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9LPL3.1

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