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    BON3 Calcium-dependent phospholipid-binding Copine family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 837408, updated on 18-Sep-2024

    Summary

    Official Symbol
    BON3
    Official Full Name
    Calcium-dependent phospholipid-binding Copine family protein
    Primary source
    TAIR:AT1G08860
    Locus tag
    AT1G08860
    See related
    Araport:AT1G08860
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    BONZAI 3; F7G19.25; F7G19_25
    Summary
    Encodes a copine-like protein, which is a member of a newly identified class of calcium-dependent, phospholipid binding proteins that are present in a wide range of organisms. Overexpression of this gene suppresses bon1-1 phenotypes. Double mutant analyses with bon1-1 suggest that BON1 and BON3 have overlapping functions in maintaining cellular homeostasis and inhibiting cell death.
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    Genomic context

    See BON3 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    16
    Sequence:
    Chromosome: 1; NC_003070.9 (2841969..2846350)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene copper/zinc superoxide dismutase 1 Neighboring gene DNA replication helicase Neighboring gene Ribosomal L18p/L5e family protein Neighboring gene tRNA-Ala Neighboring gene Histone superfamily protein

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General protein information

    Preferred Names
    Calcium-dependent phospholipid-binding Copine family protein
    NP_172362.3
    • BONZAI 3 (BON3); FUNCTIONS IN: calcium-dependent phospholipid binding; INVOLVED IN: N-terminal protein myristoylation, cellular homeostasis, positive regulation of cellular defense response, negative regulation of cell death; EXPRESSED IN: sperm cell, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Copine (InterPro:IPR010734), C2 calcium-dependent membrane targeting (InterPro:IPR000008), von Willebrand factor, type A (InterPro:IPR002035); BEST Arabidopsis thaliana protein match is: DCD (Development and Cell Death) domain protein (TAIR:AT5G61910.4); Has 1559 Blast hits to 1479 proteins in 107 species: Archae - 0; Bacteria - 0; Metazoa - 903; Fungi - 12; Plants - 319; Viruses - 0; Other Eukaryotes - 325 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      2841969..2846350
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_100759.4NP_172362.3  Calcium-dependent phospholipid-binding Copine family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_172362.3

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O04042, Q1KS96, Q5XQC7
      UniProtKB/TrEMBL
      A0A178WMW0, A0A5S9TED8
      Conserved Domains (3) summary
      cd04047
      Location:197302
      C2B_Copine; C2 domain second repeat in Copine
      cd04048
      Location:52177
      C2A_Copine; C2 domain first repeat in Copine
      cd01459
      Location:312567
      vWA_copine_like; VWA Copine: Copines are phospholipid-binding proteins originally identified in paramecium. They are found in human and orthologues have been found in C. elegans and Arabidopsis Thaliana. None have been found in D. Melanogaster or S. Cereviciae. ...