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    CCP2 ubiquitin-fold modifier [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 844107, updated on 18-Sep-2024

    Summary

    Official Symbol
    CCP2
    Official Full Name
    ubiquitin-fold modifier
    Primary source
    TAIR:AT1G77710
    Locus tag
    AT1G77710
    See related
    Araport:AT1G77710
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AtCCP2; conserved in ciliated species and in the land plants 2; T32E8.4; T32E8_4
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    Genomic context

    See CCP2 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    4
    Sequence:
    Chromosome: 1; NC_003070.9 (29206567..29208145)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Pathogenesis-related thaumatin superfamily protein Neighboring gene miscRNA Neighboring gene ncRNA Neighboring gene putative protein kinase 1

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    NM_106420.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in protein ufmylation IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in cytosol HDA PubMed 

    General protein information

    Preferred Names
    ubiquitin-fold modifier
    NP_177894.1
    • CONTAINS InterPro DOMAIN/s: Ubiquitin-like, Ufm1 (InterPro:IPR005375); Has 244 Blast hits to 244 proteins in 106 species: Archae - 0; Bacteria - 0; Metazoa - 149; Fungi - 0; Plants - 47; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      29206567..29208145
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_106420.5NP_177894.1  ubiquitin-fold modifier [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_177894.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9CA23
      UniProtKB/TrEMBL
      A0A178WJE1, A0A5S9WV89
      Conserved Domains (1) summary
      cd01766
      Location:781
      Ubl_UFM1; ubiquitin-like (Ubl) domain found in ubiquitin fold modifier 1 (UFM1)