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    AWPM-19-like family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 839491, updated on 18-Sep-2024

    Summary

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    Official Full Name
    AWPM-19-like family protein
    Primary source
    TAIR:AT1G04560
    Locus tag
    AT1G04560
    See related
    Araport:AT1G04560
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T1G11.19; T1G11_19
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    3
    Sequence:
    Chromosome: 1; NC_003070.9 (1244947..1246059)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene AUX/IAA transcriptional regulator family protein Neighboring gene uncharacterized protein Neighboring gene Major facilitator superfamily protein Neighboring gene miscRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_100335.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    AWPM-19-like family protein
    NP_563710.1
    • AWPM-19-like family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: AWPM-19-like (InterPro:IPR008390); BEST Arabidopsis thaliana protein match is: AWPM-19-like family protein (TAIR:AT5G46530.1); Has 177 Blast hits to 177 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 177; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      1244947..1246059
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_100335.4 → NP_563710.1  AWPM-19-like family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_563710.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WQ99, O23029
      Conserved Domains (1) summary
      pfam05512
      Location:15 → 143
      AWPM-19; AWPM-19-like family
    Nucleotide Protein
    Heading Accession and Version

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