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    FLA20 putative fasciclin-like arabinogalactan protein 20 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 834095, updated on 18-Sep-2024

    Summary

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    Official Symbol
    FLA20
    Official Full Name
    putative fasciclin-like arabinogalactan protein 20
    Primary source
    TAIR:AT5G40940
    Locus tag
    AT5G40940
    See related
    Araport:AT5G40940
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MMG1.3; MMG1_3; putative fasciclin-like arabinogalactan protein 20
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    Genomic context

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    See FLA20 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    1
    Sequence:
    Chromosome: 5; NC_003076.8 (16406631..16407930, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene miscRNA Neighboring gene translocase of outer membrane 20-4 Neighboring gene miscRNA Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    putative fasciclin-like arabinogalactan protein 20
    NP_198910.1
    • putative fasciclin-like arabinogalactan protein 20 (FLA20); CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      16406631..16407930 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_123459.2 → NP_198910.1  putative fasciclin-like arabinogalactan protein 20 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_198910.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9FGW0
      UniProtKB/TrEMBL
      A0A178UHK5
      Conserved Domains (1) summary
      smart00554
      Location:292 → 384
      FAS1; Four repeated domains in the Fasciclin I family of proteins, present in many other contexts
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9FGW0.1

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