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    GSL03 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 817755, updated on 22-Aug-2024

    Summary

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    Official Symbol
    GSL03
    Primary source
    TAIR:AT2G31960
    Locus tag
    AT2G31960
    See related
    Araport:AT2G31960
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATGSL03; ATGSL3; F22D22.29; F22D22_29; glucan synthase-like 3
    Summary
    encodes a protein similar to callose synthase
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    43
    Sequence:
    Chromosome: 2; NC_003071.7 (13588522..13600430)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene low-molecular-weight cysteine-rich 76 Neighboring gene cofactor of nitrate reductase and xanthine dehydrogenase 2 Neighboring gene ncRNA Neighboring gene low-molecular-weight cysteine-rich 75 Neighboring gene DNA repair-recombination protein (RAD50) Neighboring gene uncharacterized protein Neighboring gene PHYTOCYSTATIN 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Markers

    Homology

    NM_001336362.1
    NM_001336363.1
    NM_179847.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables 1,3-beta-D-glucan synthase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables 1,3-beta-D-glucan synthase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    enables glycosyltransferase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Process Evidence Code Pubs
    involved_in (1->3)-beta-D-glucan biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    part_of 1,3-beta-D-glucan synthase complex IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    glucan synthase-like 3
    NP_001318331.1
    • glucan synthase-like 3 (GSL03); FUNCTIONS IN: transferase activity, transferring glycosyl groups, 1,3-beta-glucan synthase activity; INVOLVED IN: 1,3-beta-glucan biosynthetic process; LOCATED IN: 1,3-beta-glucan synthase complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 48 (InterPro:IPR003440), Protein of unknown function DUF605 (InterPro:IPR006745); BEST Arabidopsis thaliana protein match is: callose synthase 1 (TAIR:AT1G05570.1).
    NP_850178.2
    • glucan synthase-like 3 (GSL03); FUNCTIONS IN: transferase activity, transferring glycosyl groups, 1,3-beta-glucan synthase activity; INVOLVED IN: 1,3-beta-glucan biosynthetic process; LOCATED IN: 1,3-beta-glucan synthase complex, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 48 (InterPro:IPR003440), Protein of unknown function DUF605 (InterPro:IPR006745); BEST Arabidopsis thaliana protein match is: callose synthase 1 (TAIR:AT1G05570.1); Has 1376 Blast hits to 1046 proteins in 175 species: Archae - 0; Bacteria - 0; Metazoa - 66; Fungi - 693; Plants - 541; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      13588522..13600430
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001202724.2 → NP_001189653.1  glucan synthase-like 3 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001189653.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4IRV4, Q8GYW2, Q9SL03
      UniProtKB/TrEMBL
      A0A178VYD1, A0A5S9X3E3, A0A654F340
      Conserved Domains (3) summary
      pfam02364
      Location:1048 → 1805
      Glucan_synthase; 1,3-beta-glucan synthase component
      pfam04652
      Location:47 → 169
      Vta1; Vta1 like
      pfam14288
      Location:317 → 430
      FKS1_dom1; 1,3-beta-glucan synthase subunit FKS1, domain-1

    2. NM_001336361.1 → NP_001318331.1  glucan synthase-like 3 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4IRV4, Q8GYW2, Q9SL03
      UniProtKB/TrEMBL
      A0A178VYD1, A0A5S9X3E3, A0A654F340
      Conserved Domains (3) summary
      pfam02364
      Location:1048 → 1805
      Glucan_synthase; 1,3-beta-glucan synthase component
      pfam04652
      Location:47 → 169
      Vta1; Vta1 like
      pfam14288
      Location:317 → 430
      FKS1_dom1; 1,3-beta-glucan synthase subunit FKS1, domain-1

    3. NM_179847.3 → NP_850178.2  glucan synthase-like 3 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_850178.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4IRV4, Q8GYW2, Q9SL03
      UniProtKB/TrEMBL
      A0A178VYD1, A0A5S9X3E3, A0A654F340
      Conserved Domains (3) summary
      pfam02364
      Location:1048 → 1805
      Glucan_synthase; 1,3-beta-glucan synthase component
      pfam04652
      Location:47 → 169
      Vta1; Vta1 like
      pfam14288
      Location:317 → 430
      FKS1_dom1; 1,3-beta-glucan synthase subunit FKS1, domain-1

    4. NM_001336362.1 → NP_001323730.1  glucan synthase-like 3 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AXZ6, A0A654F340

    5. NM_001336363.1 → NP_001323731.1  glucan synthase-like 3 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4IRV4, Q8GYW2, Q9SL03
      UniProtKB/TrEMBL
      A0A178VYD1, A0A5S9X3E3, A0A654F340
      Conserved Domains (3) summary
      pfam02364
      Location:1048 → 1805
      Glucan_synthase; 1,3-beta-glucan synthase component
      pfam04652
      Location:47 → 169
      Vta1; Vta1 like
      pfam14288
      Location:317 → 430
      FKS1_dom1; 1,3-beta-glucan synthase subunit FKS1, domain-1
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SL03.3

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