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    kif20a.L kinesin family member 20A L homeolog [ Xenopus laevis (African clawed frog) ]

    Gene ID: 446474, updated on 18-Sep-2024

    Summary

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    Official Symbol
    kif20a.L
    Official Full Name
    kinesin family member 20A L homeolog
    Primary source
    Xenbase:XB-GENE-967274
    Locus tag
    XELAEV_18017341mg
    See related
    EnsemblRapid:ENSXLAG00005005541
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus laevis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
    Also known as
    mklp2; kif20a; rab6kifl
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    Genomic context

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    See kif20a.L in Genome Data Viewer
    Location:
    chromosome: 3L
    Exon count:
    21
    Annotation release Status Assembly Chr Location
    101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 3L NC_054375.1 (55161107..55174814)
    100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 3L NC_030728.1 (40704875..40718548)

    Chromosome 3L - NC_054375.1Genomic Context describing neighboring genes Neighboring gene H/ACA ribonucleoprotein complex subunit 2-like protein Neighboring gene bromodomain containing 8 L homeolog Neighboring gene cell division cycle 23 L homeolog Neighboring gene GDNF family receptor alpha 3 L homeolog

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
    2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Clone Names

    • MGC79056

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables cytoskeletal motor activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables microtubule binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables microtubule motor activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within microtubule-based movement IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
    		  
    part_of kinesin complex IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in microtubule IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    kinesin family member 20A L homeolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001093170.1 → NP_001086639.1  kinesin family member 20A L homeolog

      See identical proteins and their annotated locations for NP_001086639.1

      Status: PROVISIONAL

      Source sequence(s)
      BC077224
      UniProtKB/TrEMBL
      A0A974DBI6, Q6DEA8
      Related
      ENSXLAP00005016346.1, ENSXLAT00005016640.1
      Conserved Domains (2) summary
      cd01368
      Location:61 → 504
      KISc_KIF23_like; Kinesin motor domain, KIF23-like subgroup
      pfam00225
      Location:68 → 505
      Kinesin; Kinesin motor domain

    RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_laevis_v10.1 Primary Assembly

    Genomic

    1. NC_054375.1 Reference Xenopus_laevis_v10.1 Primary Assembly

      Range
      55161107..55174814
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_018251009.2 → XP_018106498.1  kinesin family member 20A L homeolog isoform X1

      UniProtKB/TrEMBL
      A0A1L8GY32, A0A974DBI6, A0A974HSX3
      Related
      ENSXLAP00005016343.1, ENSXLAT00005016637.1
      Conserved Domains (3) summary
      COG1196
      Location:557 → 718
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      cd01368
      Location:61 → 504
      KISc_KIF23_like; Kinesin motor domain, KIF23-like subgroup
      cd21787
      Location:620 → 655
      RBD_KIF20A; RAB6 binding domain (RBD) found in kinesin-like protein KIF20A, and similar proteins

    2. XM_041585117.1 → XP_041441051.1  kinesin family member 20A L homeolog isoform X1

      UniProtKB/TrEMBL
      A0A1L8GY32, A0A974DBI6, A0A974HSX3
      Conserved Domains (3) summary
      COG1196
      Location:557 → 718
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      cd01368
      Location:61 → 504
      KISc_KIF23_like; Kinesin motor domain, KIF23-like subgroup
      cd21787
      Location:620 → 655
      RBD_KIF20A; RAB6 binding domain (RBD) found in kinesin-like protein KIF20A, and similar proteins
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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