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    slc18a2.L solute carrier family 18 member A2 L homeolog [ Xenopus laevis (African clawed frog) ]

    Gene ID: 379730, updated on 18-Sep-2024

    Summary

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    Official Symbol
    slc18a2.L
    Official Full Name
    solute carrier family 18 member A2 L homeolog
    Primary source
    Xenbase:XB-GENE-6254956
    Locus tag
    XELAEV_18018734mg
    See related
    EnsemblRapid:ENSXLAG00005002611
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus laevis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
    Also known as
    vmat2; slc18a2
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    Genomic context

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    See slc18a2.L in Genome Data Viewer
    Location:
    chromosome: 3L
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 3L NC_054375.1 (137283488..137301857, complement)
    100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 3L NC_030728.1 (121720955..121773726, complement)

    Chromosome 3L - NC_054375.1Genomic Context describing neighboring genes Neighboring gene TELO2 interacting protein 2 L homeolog Neighboring gene chromaffin granule amine transporter Neighboring gene chromaffin granule amine transporter-like Neighboring gene 60S ribosomal protein L22-like Neighboring gene synaptic vesicular amine transporter

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
    2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Clone Names

    • MGC69173

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables serotonin:sodium:chloride symporter activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within aminergic neurotransmitter loading into synaptic vesicle IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in synaptic vesicle membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in terminal bouton IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    solute carrier family 18 member A2 L homeolog
    Names
    solute carrier family 18 (vesicular monoamine transporter), member 2 L homeolog
    solute carrier family 18 (vesicular monoamine), member 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001086569.1 → NP_001080038.1  solute carrier family 18 member A2 L homeolog

      See identical proteins and their annotated locations for NP_001080038.1

      Status: PROVISIONAL

      Source sequence(s)
      BC059350
      UniProtKB/TrEMBL
      A0A974DEB6, Q6PCF0
      Related
      ENSXLAP00005007741.1, ENSXLAT00005007864.1
      Conserved Domains (2) summary
      cd06174
      Location:115 → 455
      MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...
      pfam07690
      Location:115 → 421
      MFS_1; Major Facilitator Superfamily

    RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_laevis_v10.1 Primary Assembly

    Genomic

    1. NC_054375.1 Reference Xenopus_laevis_v10.1 Primary Assembly

      Range
      137283488..137301857 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials