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    Gm46117 predicted gene, 46117 [ Mus musculus (house mouse) ]

    Gene ID: 108167658, updated on 17-Aug-2024

    Summary

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    Official Symbol
    Gm46117provided by MGI
    Official Full Name
    predicted gene, 46117provided by MGI
    Primary source
    MGI:MGI:5825754
    See related
    AllianceGenome:MGI:5825754
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

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    See Gm46117 in Genome Data Viewer
    Location:
    1 D; 1
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (91743149..91759044, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (91815427..91831322, complement)

    Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer ABC_E1555 Neighboring gene CapStarr-seq enhancer MGSCv37_chr1:93497438-93497621 Neighboring gene CapStarr-seq enhancer MGSCv37_chr1:93498155-93498356 Neighboring gene ankyrin repeat and SOCS box-containing 1 Neighboring gene CapStarr-seq enhancer MGSCv37_chr1:93527619-93527999 Neighboring gene CapStarr-seq enhancer MGSCv37_chr1:93529086-93529287 Neighboring gene CapStarr-seq enhancer MGSCv37_chr1:93547237-93547420 Neighboring gene predicted gene 28380 Neighboring gene CapStarr-seq enhancer MGSCv37_chr1:93555659-93555944 Neighboring gene STARR-seq mESC enhancer starr_01699 Neighboring gene STARR-seq mESC enhancer starr_01700 Neighboring gene twist basic helix-loop-helix transcription factor 2 Neighboring gene predicted gene, 46242 Neighboring gene VISTA enhancer mm901 Neighboring gene histone deacetylase 4 Neighboring gene predicted gene, 50604

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

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    GeneRIFs: Gene References Into Functions

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000067.7 Reference GRCm39 C57BL/6J

      Range
      91743149..91759044 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_001779204.2 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version