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    LOC105377567 uncharacterized LOC105377567 [ Homo sapiens (human) ]

    Gene ID: 105377567, updated on 17-Sep-2024

    Summary

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    Gene symbol
    LOC105377567
    Gene description
    uncharacterized LOC105377567
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

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    See LOC105377567 in Genome Data Viewer
    Location:
    4q34.3
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 4 NC_000004.12 (180397522..180555979)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 4 NC_060928.1 (183739630..184420198)

    Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124900818 Neighboring gene uncharacterized LOC124900623 Neighboring gene uncharacterized LOC124900819 Neighboring gene ReSE screen-validated silencer GRCh37_chr4:181126772-181126947 Neighboring gene VISTA enhancer hs886 Neighboring gene ReSE screen-validated silencer GRCh37_chr4:181292383-181292589 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr4:181301504-181302703 Neighboring gene ReSE screen-validated silencer GRCh37_chr4:181317681-181317842 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_76597 Neighboring gene uncharacterized LOC105377565 Neighboring gene NADH:ubiquinone oxidoreductase subunit B5 pseudogene 1 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr4:181561266-181561952 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr4:181619618-181620817 Neighboring gene uncharacterized LOC124900820

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    Genotypes

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000004.12 Reference GRCh38.p14 Primary Assembly

      Range
      180397522..180555979
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_007058395.1 RNA Sequence

    2. XR_007058394.1 RNA Sequence

    3. XR_001741469.2 RNA Sequence

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060928.1 Alternate T2T-CHM13v2.0

      Range
      183739630..184420198
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_007075195.1 RNA Sequence

    2. XR_007075193.1 RNA Sequence

    3. XR_007075194.1 RNA Sequence

    4. XR_007075199.1 RNA Sequence

    5. XR_007075197.1 RNA Sequence

    6. XR_007075198.1 RNA Sequence

    7. XR_007075196.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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