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    LOC105375330 uncharacterized LOC105375330 [ Homo sapiens (human) ]

    Gene ID: 105375330, updated on 17-Sep-2024

    Summary

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    Gene symbol
    LOC105375330
    Gene description
    uncharacterized LOC105375330
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

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    See LOC105375330 in Genome Data Viewer
    Location:
    7q11.21
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 7 NC_000007.14 (65008674..65038261, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 7 NC_060931.1 (66214859..66244156, complement)

    Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene ERV3-1-ZNF117 readthrough Neighboring gene vomeronasal 1 receptor 43 pseudogene Neighboring gene zinc finger protein 117 Neighboring gene endogenous retrovirus group 3 member 1, envelope Neighboring gene Sharpr-MPRA regulatory region 12375 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26070 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18197 Neighboring gene ReSE screen-validated silencer GRCh37_chr7:64480738-64480945 Neighboring gene RNA, U6 small nuclear 1229, pseudogene Neighboring gene uncharacterized LOC105375329 Neighboring gene MPRA-validated peak6535 silencer Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18198 Neighboring gene vitamin K epoxide reductase complex subunit 1 like 1 pseudogene Neighboring gene NANOG hESC enhancer GRCh37_chr7:64503075-64503587 Neighboring gene chaperonin containing TCP1 subunit 6 pseudogene 3 Neighboring gene MPRA-validated peak6536 silencer Neighboring gene uncharacterized LOC124901663 Neighboring gene small nucleolar RNA, H/ACA box 22C

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    Genotypes

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000007.14 Reference GRCh38.p14 Primary Assembly

      Range
      65008674..65038261 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_927607.1 RNA Sequence

    2. XR_001744932.2 RNA Sequence

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060931.1 Alternate T2T-CHM13v2.0

      Range
      66214859..66244156 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_007077591.1 RNA Sequence

    2. XR_007077592.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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