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    LOC105373608 uncharacterized LOC105373608 [ Homo sapiens (human) ]

    Gene ID: 105373608, updated on 17-Sep-2024

    Summary

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    Gene symbol
    LOC105373608
    Gene description
    uncharacterized LOC105373608
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Biased expression in liver (RPKM 2.8) and kidney (RPKM 0.4) See more
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    Genomic context

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    See LOC105373608 in Genome Data Viewer
    Location:
    2q14.3
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (127424700..127432706, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (127859969..127867958, complement)

    Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene translation initiation factor IF-2-like Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 11932 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 16486 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 16487 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:128172964-128173726 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 16488 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:128180062-128180860 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:128180861-128181657 Neighboring gene protein C, inactivator of coagulation factors Va and VIIIa Neighboring gene microRNA 4783 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:128195319-128196319 Neighboring gene uncharacterized LOC124907884 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:128221175-128221782 Neighboring gene RNA, U4 small nuclear 48, pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    Genotypes

    General gene information

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    Homology

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

      Range
      127424700..127432706 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_007087228.1 RNA Sequence

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060926.1 Alternate T2T-CHM13v2.0

      Range
      127859969..127867958 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_007072482.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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