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    LOC105373242 uncharacterized LOC105373242 [ Homo sapiens (human) ]

    Gene ID: 105373242, updated on 22-Oct-2024

    Summary

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    Gene symbol
    LOC105373242
    Gene description
    uncharacterized LOC105373242
    See related
    Ensembl:ENSG00000306747
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

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    See LOC105373242 in Genome Data Viewer
    Location:
    Xq13.1
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) X NC_000023.11 (69031120..69084509, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) X NC_060947.1 (67464509..67517892, complement)

    Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene SERPINE1 mRNA binding protein 1 pseudogene 1 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:68042984-68043484 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:68043485-68043985 Neighboring gene OCT4-NANOG-H3K4me1 hESC enhancer GRCh37_chrX:68066477-68066977 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:68070598-68071098 Neighboring gene ephrin B1 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:68099266-68099854 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:68114641-68115154 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:68115155-68115666 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:68123133-68123632 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:68131927-68132591 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:68132592-68133256 Neighboring gene ReSE screen-validated silencer GRCh37_chrX:68149462-68149665 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:68209602-68210102 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 29727 Neighboring gene uncharacterized LOC102723911 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:68253378-68254186 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:68256271-68256772 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:68280594-68281495 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:68314526-68315026 Neighboring gene uncharacterized LOC124905196 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:68324595-68325188 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:68325189-68325781 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:68341652-68342161 Neighboring gene uncharacterized LOC107985646

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    Genotypes

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000023.11 Reference GRCh38.p14 Primary Assembly

      Range
      69031120..69084509 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_001755876.1 RNA Sequence

    2. XR_005647090.2 RNA Sequence

    3. XR_005647091.2 RNA Sequence

      Related
      ENST00000820715.1

    4. XR_007068260.1 RNA Sequence

    5. XR_005647088.2 RNA Sequence

    6. XR_005647089.2 RNA Sequence

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060947.1 Alternate T2T-CHM13v2.0

      Range
      67464509..67517892 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_007091209.1 RNA Sequence

    2. XR_007091206.1 RNA Sequence

    3. XR_007091207.1 RNA Sequence

    4. XR_007091208.1 RNA Sequence

    5. XR_007091204.1 RNA Sequence

    6. XR_007091205.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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