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    LOC105369983 uncharacterized LOC105369983 [ Homo sapiens (human) ]

    Gene ID: 105369983, updated on 17-Sep-2024

    Summary

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    Gene symbol
    LOC105369983
    Gene description
    uncharacterized LOC105369983
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

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    See LOC105369983 in Genome Data Viewer
    Location:
    12q24.11-q24.12
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 12 NC_000012.12 (111285229..111320162, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 12 NC_060936.1 (111264878..111299814, complement)

    Chromosome 12 - NC_000012.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105369981 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr12:111478778-111479544 Neighboring gene VISTA enhancer hs611 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:111498362-111498864 Neighboring gene NANOG hESC enhancer GRCh37_chr12:111510029-111510544 Neighboring gene cut like homeobox 2 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 7029 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 7030 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:111537905-111538524 Neighboring gene H3K27ac hESC enhancer GRCh37_chr12:111542473-111542974 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:111598487-111599098 Neighboring gene H3K27ac hESC enhancer GRCh37_chr12:111620445-111620945 Neighboring gene uncharacterized LOC124903018 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:111631064-111631574 Neighboring gene H3K27ac hESC enhancer GRCh37_chr12:111655517-111656018 Neighboring gene H3K27ac hESC enhancer GRCh37_chr12:111656019-111656518 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:111686753-111687420 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:111730689-111731190 Neighboring gene ReSE screen-validated silencer GRCh37_chr12:111733063-111733233 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr12:111736695-111737688 Neighboring gene microRNA 6760 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:111791286-111791786 Neighboring gene RNA, 5S ribosomal pseudogene 373 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:111799560-111800216 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 4865 Neighboring gene PH domain containing endocytic trafficking adaptor 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    Genotypes

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000012.12 Reference GRCh38.p14 Primary Assembly

      Range
      111285229..111320162 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_945341.2 RNA Sequence

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060936.1 Alternate T2T-CHM13v2.0

      Range
      111264878..111299814 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_007083032.1 RNA Sequence

    2. XR_007083033.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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    Research Materials