U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    Gm41230 predicted gene, 41230 [ Mus musculus (house mouse) ]

    Gene ID: 105245841, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    Gm41230provided by MGI
    Official Full Name
    predicted gene, 41230provided by MGI
    Primary source
    MGI:MGI:5624115
    See related
    Ensembl:ENSMUSG00000115580 AllianceGenome:MGI:5624115
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Expression
    Low expression observed in reference dataset See more
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See Gm41230 in Genome Data Viewer
    Location:
    14 E2.2; 14
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 14 NC_000080.7 (99759273..99814341)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 14 NC_000080.6 (99521837..99576905)

    Chromosome 14 - NC_000080.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 25130 Neighboring gene STARR-seq mESC enhancer starr_37443 Neighboring gene predicted gene, 49219 Neighboring gene STARR-seq mESC enhancer starr_37445 Neighboring gene STARR-positive B cell enhancer mm9_chr14:99864045-99864346 Neighboring gene STARR-seq mESC enhancer starr_37446 Neighboring gene STARR-seq mESC enhancer starr_37447 Neighboring gene STARR-seq mESC enhancer starr_37448 Neighboring gene STARR-seq mESC enhancer starr_37449 Neighboring gene STARR-seq mESC enhancer starr_37450 Neighboring gene predicted gene, 34061 Neighboring gene STARR-seq mESC enhancer starr_37451 Neighboring gene predicted gene 9298 Neighboring gene predicted gene, 33880

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Expression

    Go to the top of the page Help
    • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Hansen GM, et al. Genome Res, 2008 Oct. PMID 18799693, Free PMC Article
    2. Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Zambrowicz BP, et al. Proc Natl Acad Sci U S A, 2003 Nov 25. PMID 14610273, Free PMC Article
    3. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
    4. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
    5. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article

    See all (9) citations in PubMed

    GeneRIFs: Gene References Into Functions

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_167778.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC154838, AC164879

    2. NR_167779.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC154838, AC164879
      Related
      ENSMUST00000228876.2

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000080.7 Reference GRCm39 C57BL/6J

      Range
      99759273..99814341
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.