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    Gm40439 predicted gene, 40439 [ Mus musculus (house mouse) ]

    Gene ID: 105244917, updated on 17-Aug-2024

    Summary

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    Official Symbol
    Gm40439provided by MGI
    Official Full Name
    predicted gene, 40439provided by MGI
    Primary source
    MGI:MGI:5623324
    See related
    AllianceGenome:MGI:5623324
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

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    See Gm40439 in Genome Data Viewer
    Location:
    12 C3; 12
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 12 NC_000078.7 (71607837..71610595)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 12 NC_000078.6 (71561109..71563821)

    Chromosome 12 - NC_000078.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_32421 Neighboring gene STARR-seq mESC enhancer starr_32422 Neighboring gene calponin 3, acidic pseudogene Neighboring gene VISTA enhancer mm795 Neighboring gene RIKEN cDNA 4930404H11 gene Neighboring gene RIKEN cDNA 9630002D21 gene Neighboring gene STARR-seq mESC enhancer starr_32424 Neighboring gene STARR-seq mESC enhancer starr_32425 Neighboring gene predicted gene, 46356 Neighboring gene STARR-seq mESC enhancer starr_32426 Neighboring gene UPF0538 protein C2orf76 homolog pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

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    GeneRIFs: Gene References Into Functions

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000078.7 Reference GRCm39 C57BL/6J

      Range
      71607837..71610595
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_872807.2 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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    Research Materials