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    Gm39683 predicted gene, 39683 [ Mus musculus (house mouse) ]

    Gene ID: 105243984, updated on 17-Aug-2024

    Summary

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    Official Symbol
    Gm39683provided by MGI
    Official Full Name
    predicted gene, 39683provided by MGI
    Primary source
    MGI:MGI:5622568
    See related
    AllianceGenome:MGI:5622568
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

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    See Gm39683 in Genome Data Viewer
    Location:
    1 G3; 1
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (156571974..156580831)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (156744404..156753261)

    Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_02753 Neighboring gene STARR-positive B cell enhancer ABC_E4363 Neighboring gene STARR-seq mESC enhancer starr_02755 Neighboring gene torsin family 3, member A Neighboring gene FAM20B, glycosaminoglycan xylosylkinase Neighboring gene CapStarr-seq enhancer MGSCv37_chr1:158640993-158641176 Neighboring gene STARR-positive B cell enhancer mm9_chr1:158682524-158682825 Neighboring gene PCNA-associated factor pseudogene Neighboring gene Ral GEF with PH domain and SH3 binding motif 2 Neighboring gene angiopoietin-like 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

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    GeneRIFs: Gene References Into Functions

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000067.7 Reference GRCm39 C57BL/6J

      Range
      156571974..156580831
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_865660.1 RNA Sequence

    2. XR_865659.1 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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    Research Materials