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    Gm39242 predicted gene, 39242 [ Mus musculus (house mouse) ]

    Gene ID: 105243278, updated on 17-Aug-2024

    Summary

    Official Symbol
    Gm39242provided by MGI
    Official Full Name
    predicted gene, 39242provided by MGI
    Primary source
    MGI:MGI:5622127
    See related
    AllianceGenome:MGI:5622127
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

    See Gm39242 in Genome Data Viewer
    Location:
    8 D3; 8
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 8 NC_000074.7 (108527061..108560969, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 8 NC_000074.6 (107800429..107834337, complement)

    Chromosome 8 - NC_000074.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_22613 Neighboring gene STARR-seq mESC enhancer starr_22614 Neighboring gene STARR-seq mESC enhancer starr_22615 Neighboring gene STARR-seq mESC enhancer starr_22616 Neighboring gene proteasome (prosome, macropain) 26S subunit, non-ATPase, 7 Neighboring gene STARR-seq mESC enhancer starr_22618 Neighboring gene predicted gene 8940 Neighboring gene STARR-seq mESC enhancer starr_22620 Neighboring gene predicted gene, 42040 Neighboring gene STARR-seq mESC enhancer starr_22621 Neighboring gene STARR-seq mESC enhancer starr_22622 Neighboring gene STARR-seq mESC enhancer starr_22623 Neighboring gene VISTA enhancer mm1540 Neighboring gene STARR-seq mESC enhancer starr_22625 Neighboring gene STARR-positive B cell enhancer mm9_chr8:110841475-110841776 Neighboring gene STARR-seq mESC enhancer starr_22626 Neighboring gene STARR-seq mESC enhancer starr_22627 Neighboring gene predicted gene, 34675 Neighboring gene zinc finger homeobox 3 Neighboring gene predicted gene, 51549

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000074.7 Reference GRCm39 C57BL/6J

      Range
      108527061..108560969 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_879158.1 RNA Sequence