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    Gm38469 predicted gene, 38469 [ Mus musculus (house mouse) ]

    Gene ID: 102634841, updated on 17-Aug-2024

    Summary

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    Official Symbol
    Gm38469provided by MGI
    Official Full Name
    predicted gene, 38469provided by MGI
    Primary source
    MGI:MGI:5621354
    See related
    AllianceGenome:MGI:5621354
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

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    See Gm38469 in Genome Data Viewer
    Location:
    15 F1; 15
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 15 NC_000081.7 (96032698..96185141, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 15 NC_000081.6 (96134817..96287398, complement)

    Chromosome 15 - NC_000081.7Genomic Context describing neighboring genes Neighboring gene anoctamin 6 Neighboring gene predicted gene, 53908 Neighboring gene STARR-positive B cell enhancer mm9_chr15:95792991-95793292 Neighboring gene STARR-positive B cell enhancer ABC_E7409 Neighboring gene STARR-seq mESC enhancer starr_39579 Neighboring gene nuclear receptor coactivator 2 pseudogene Neighboring gene nuclear receptor coactivator 2 pseudogene Neighboring gene RIKEN cDNA 2610037D02 gene Neighboring gene RIKEN cDNA 4833422M21 gene Neighboring gene STARR-seq mESC enhancer starr_39583 Neighboring gene eukaryotic translation initiation factor 3, subunit I pseudogene Neighboring gene STARR-seq mESC enhancer starr_39585 Neighboring gene predicted gene, 53909 Neighboring gene RIKEN cDNA E330033B04 gene Neighboring gene CapStarr-seq enhancer MGSCv37_chr15:96114695-96114804 Neighboring gene STARR-seq mESC enhancer starr_39586 Neighboring gene ribosomal protein S2 pseudogene Neighboring gene STARR-seq mESC enhancer starr_39587 Neighboring gene AT-rich interaction domain 2 Neighboring gene SR-related CTD-associated factor 11 Neighboring gene predicted gene, 41408

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

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    Related articles in PubMed

    1. Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Hansen GM, et al. Genome Res, 2008 Oct. PMID 18799693, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    spidroin-2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000081.7 Reference GRCm39 C57BL/6J

      Range
      96032698..96185141 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011245785.4 → XP_011244087.1  spidroin-2

      See identical proteins and their annotated locations for XP_011244087.1

    2. XM_036159689.1 → XP_036015582.1  spidroin-2

    3. XM_036159688.1 → XP_036015581.1  spidroin-2

    Nucleotide Protein
    Heading Accession and Version

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