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    PENK-AS1 PENK antisense RNA 1 [ Homo sapiens (human) ]

    Gene ID: 101929415, updated on 17-Sep-2024

    Summary

    Official Symbol
    PENK-AS1provided by HGNC
    Official Full Name
    PENK antisense RNA 1provided by HGNC
    Primary source
    HGNC:HGNC:55519
    See related
    Ensembl:ENSG00000254254 AllianceGenome:HGNC:55519
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Biased expression in adrenal (RPKM 6.8), testis (RPKM 3.7) and 5 other tissues See more
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    Genomic context

    See PENK-AS1 in Genome Data Viewer
    Location:
    8q12.1
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 8 NC_000008.11 (56445807..56552067)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 8 NC_060932.1 (56823050..56929327)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 8 NC_000008.10 (57358366..57464626)

    Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105375849 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:57327640-57328140 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:57328141-57328641 Neighboring gene uncharacterized LOC124901948 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:57357971-57358862 Neighboring gene proenkephalin Neighboring gene septin 10 pseudogene 1 Neighboring gene uncharacterized LOC101929398 Neighboring gene long intergenic non-protein coding RNA 968 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27401 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27402 Neighboring gene ReSE screen-validated silencer GRCh37_chr8:57477049-57477224 Neighboring gene uncharacterized LOC105375850 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:57497228-57497728 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:57497729-57498229 Neighboring gene ribosomal protein L37 pseudogene 6

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_125813.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC012349, AC013644, AC023464
      Related
      ENST00000518662.5

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000008.11 Reference GRCh38.p14 Primary Assembly

      Range
      56445807..56552067
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060932.1 Alternate T2T-CHM13v2.0

      Range
      56823050..56929327
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)