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    DNM1P50 dynamin 1 pseudogene 50 [ Homo sapiens (human) ]

    Gene ID: 101927579, updated on 17-Sep-2024

    Summary

    Official Symbol
    DNM1P50provided by HGNC
    Official Full Name
    dynamin 1 pseudogene 50provided by HGNC
    Primary source
    HGNC:HGNC:48499
    See related
    AllianceGenome:HGNC:48499
    Gene type
    pseudo
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Broad expression in testis (RPKM 3.6), thyroid (RPKM 1.9) and 24 other tissues See more
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    Genomic context

    See DNM1P50 in Genome Data Viewer
    Location:
    15q13.2
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 15 NC_000015.10 (30568598..30571721, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 15 NC_060939.1 (28361845..28364966, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 15 NC_000015.9 (30860801..30863924, complement)

    Chromosome 15 - NC_000015.10Genomic Context describing neighboring genes Neighboring gene MPHOSPH10 pseudogene 3 Neighboring gene golgin subfamily A member 6-like protein 1 Neighboring gene 15q13.2 beta inversion distal recombination region Neighboring gene golgin A8 family member Q Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:30852659-30853158 Neighboring gene RNA, 7SL, cytoplasmic 796, pseudogene Neighboring gene 15q13.2-13.3 gamma inversion proximal recombination region Neighboring gene ReSE screen-validated silencer GRCh37_chr15:30859663-30859840 Neighboring gene U8 small nucleolar RNA Neighboring gene ULK4 pseudogene 2 Neighboring gene ARHGAP11B divergent transcript Neighboring gene golgin A8 family member H Neighboring gene RNA, 7SL, cytoplasmic 628, pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Phenotypes

    EBI GWAS Catalog

    Description
    A genome-wide association study and biological pathway analysis of epilepsy prognosis in a prospective cohort of newly treated epilepsy.
    EBI GWAS Catalog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_145478.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC026150, HY040841

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000015.10 Reference GRCh38.p14 Primary Assembly

      Range
      30568598..30571721 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCh38.p14 PATCHES

    Genomic

    1. NW_011332701.1 Reference GRCh38.p14 PATCHES

      Range
      2566916..2570039
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCh38.p14 ALT_REF_LOCI_2

    Genomic

    1. NT_187660.1 Reference GRCh38.p14 ALT_REF_LOCI_2

      Range
      2679400..2682523
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060939.1 Alternate T2T-CHM13v2.0

      Range
      28361845..28364966 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)