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    TBC1D3JP TBC1 domain family member 3J, pseudogene [ Homo sapiens (human) ]

    Gene ID: 100510707, updated on 17-Sep-2024

    Summary

    Official Symbol
    TBC1D3JPprovided by HGNC
    Official Full Name
    TBC1 domain family member 3J, pseudogeneprovided by HGNC
    Primary source
    HGNC:HGNC:51247
    See related
    Ensembl:ENSG00000274658 AllianceGenome:HGNC:51247
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    TBC1D3J
    Expression
    Broad expression in testis (RPKM 4.5), skin (RPKM 2.0) and 22 other tissues See more
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    Genomic context

    See TBC1D3JP in Genome Data Viewer
    Location:
    17q12
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 17 NC_000017.11 (36449716..36457534, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 17 (PATCHES) NW_003315949.1 (334466..342284, complement)

    Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene nitric oxide synthase 2, inducible pseudogene Neighboring gene RNA, U6 small nuclear 1192, pseudogene Neighboring gene TBC1 domain family member 3F Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:34495357-34496016 Neighboring gene uncharacterized LOC105371749 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:34842246-34843179 Neighboring gene RNA, 5S ribosomal pseudogene 439 Neighboring gene zinc finger HIT-type containing 3

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_070952.1 

      Range
      101..7919
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000017.11 Reference GRCh38.p14 Primary Assembly

      Range
      36449716..36457534 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCh38.p14 ALT_REF_LOCI_1

    Genomic

    1. NT_187614.1 Reference GRCh38.p14 ALT_REF_LOCI_1

      Range
      684620..692438 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_001355571.1: Suppressed sequence

      Description
      NM_001355571.1: This RefSeq was removed because it is now thought that this gene does not encode a protein.