lass6 transcription factor protein [Ciona intestinalis (vase tunicate)] - Gene

Summary

Gene symbol: lass6
Gene description: transcription factor protein
See related: Ensembl:ENSCING00000011786
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Ciona intestinalis
Lineage: Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Phlebobranchia; Cionidae; Ciona
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Genomic context

Location:: chromosome: 3

Exon count:: 1

Annotation release	Status	Assembly	Chr	Location
104	current	KH (GCF_000224145.3)	3	NC_020168.2 (340892..343347)

Chromosome 3 - NC_020168.2 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_020168.2 Chromosome 3 Reference KH Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables DNA binding	IEA Inferred from Electronic Annotation more info	PubMed
enables sphingosine N-acyltransferase activity	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in ceramide biosynthetic process	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in membrane	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: transcription factor protein

Names: Ci-LAG1-like 2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001093745.1 → NP_001087214.1 transcription factor protein

See identical proteins and their annotated locations for NP_001087214.1

Status: PROVISIONAL

Source sequence(s)

AB210523

UniProtKB/TrEMBL

A0A1W2VSN4, A0A1W5BQV7, F6S909, Q4H399

Related

ENSCINP00000014663, ENSCINT00000014663

Conserved Domains (2) summary

cd00086
Location:77 → 126

homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.

pfam03798
Location:130 → 322

TRAM_LAG1_CLN8; TLC domain