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    Glycosyltransferase family 29 (sialyltransferase) family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 824043, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Glycosyltransferase family 29 (sialyltransferase) family protein
    Primary source
    TAIR:AT3G48820
    Locus tag
    AT3G48820
    See related
    Araport:AT3G48820
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    SIA2; sialyltransferase-like 2
    Summary
    Encodes a homolog of the animal sialyltransferases but sialyltransferase activity was not detected (Plant Biology 2009, 11:284). Located in the Golgi apparatus.
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    12
    Sequence:
    Chromosome: 3; NC_003074.8 (18099712..18102941, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Pyridoxal phosphate (PLP)-dependent transferases superfamily protein Neighboring gene Sterile alpha motif (SAM) domain-containing protein Neighboring gene Pentatricopeptide repeat (PPR) superfamily protein Neighboring gene tRNA nucleotidyltransferase/polyA polymerase family protein Neighboring gene polynucleotide adenylyltransferase domain/RNA recognition motif protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The cell wall pectic polymer rhamnogalacturonan-II is required for proper pollen tube elongation: implications of a putative sialyltransferase-like protein. Dumont M, et al. Ann Bot, 2014 Oct. PMID 24825296, Free PMC Article
    2. The Arabidopsis thaliana putative sialyltransferase resides in the Golgi apparatus but lacks the ability to transfer sialic acid. Daskalova SM, et al. Plant Biol (Stuttg), 2009 May. PMID 19470101
    3. Separating Golgi Proteins from Cis to Trans Reveals Underlying Properties of Cisternal Localization. Parsons HT, et al. Plant Cell, 2019 Sep. PMID 31266899, Free PMC Article
    4. Mapping the Arabidopsis organelle proteome. Dunkley TP, et al. Proc Natl Acad Sci U S A, 2006 Apr 25. PMID 16618929, Free PMC Article
    5. Isolation and proteomic characterization of the Arabidopsis Golgi defines functional and novel components involved in plant cell wall biosynthesis. Parsons HT, et al. Plant Physiol, 2012 May. PMID 22430844, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_114741.5
    NM_202675.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables glycosyltransferase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    NOT enables sialyltransferase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables sialyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in pollen germination IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in pollen tube growth IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in protein glycosylation IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in Golgi apparatus HDA PubMed 
    located_in Golgi apparatus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in Golgi apparatus ISM
    Inferred from Sequence Model
    more info
    		  
    located_in Golgi trans cisterna HDA PubMed 
    located_in endosome HDA PubMed 
    located_in trans-Golgi network HDA PubMed 

    General protein information

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    Preferred Names
    Glycosyltransferase family 29 (sialyltransferase) family protein
    NP_190451.2
    • Glycosyltransferase family 29 (sialyltransferase) family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, sialyltransferase activity; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: Golgi apparatus, membrane; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 29 (InterPro:IPR001675); BEST Arabidopsis thaliana protein match is: MALE GAMETOPHYTE DEFECTIVE 2 (TAIR:AT1G08660.1); Has 1907 Blast hits to 1892 proteins in 96 species: Archae - 0; Bacteria - 0; Metazoa - 1678; Fungi - 0; Plants - 157; Viruses - 18; Other Eukaryotes - 54 (source: NCBI BLink).
    NP_974404.1
    • Glycosyltransferase family 29 (sialyltransferase) family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, sialyltransferase activity; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: Golgi apparatus, membrane; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 29 (InterPro:IPR001675); BEST Arabidopsis thaliana protein match is: MALE GAMETOPHYTE DEFECTIVE 2 (TAIR:AT1G08660.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      18099712..18102941 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_202675.2 → NP_974404.1  Glycosyltransferase family 29 (sialyltransferase) family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_974404.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9XJ19, A0A654FE41, F4JF56
      Conserved Domains (1) summary
      pfam00777
      Location:151 → 323
      Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

    2. NM_114741.5 → NP_190451.2  Glycosyltransferase family 29 (sialyltransferase) family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_190451.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8RY00, Q9M301
      UniProtKB/TrEMBL
      A0A178VKW6, A0A7G2ESD4
      Conserved Domains (1) summary
      pfam00777
      Location:160 → 332
      Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8RY00.1

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