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LOC9660308 lysine-specific demethylase JMJ705 [ Selaginella moellendorffii ]

Gene ID: 9660308, updated on 22-Oct-2023

Summary

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Gene symbol
LOC9660308
Gene description
lysine-specific demethylase JMJ705
Locus tag
SELMODRAFT_440762
Gene type
protein coding
RefSeq status
MODEL
Organism
Selaginella moellendorffii
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Lycopodiopsida; Selaginellales; Selaginellaceae; Selaginella
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Genomic context

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See LOC9660308 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
100 current v1.0 (GCF_000143415.4) Unplaced Scaffold NW_003314273.1 (1037888..1043327, complement)

NW_003314273.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC9659524 Neighboring gene 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic Neighboring gene probable GTP-binding protein OBGC2 Neighboring gene NADP-dependent D-sorbitol-6-phosphate dehydrogenase Neighboring gene rRNA-processing protein FCF1 homolog Neighboring gene serine/threonine-protein kinase HT1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003314273 Unplaced Scaffold Reference v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables histone H3K4me/H3K4me2/H3K4me3 demethylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chromatin remodeling IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lysine-specific demethylase JMJ705

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Selaginella moellendorffii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference v1.0

Genomic

  1. NW_003314273.1 Reference v1.0

    Range
    1037888..1043327 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002969472.2 → XP_002969518.1  lysine-specific demethylase JMJ705

    See identical proteins and their annotated locations for XP_002969518.1

    UniProtKB/TrEMBL
    D8RE62
    Conserved Domains (5) summary
    pfam02373
    Location:257 → 376
    JmjC; JmjC domain, hydroxylase
    sd00017
    Location:1444 → 1466
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam02375
    Location:17 → 50
    JmjN; jmjN domain
    pfam13465
    Location:1491 → 1511
    zf-H2C2_2; Zinc-finger double domain
    pfam15909
    Location:1420 → 1495
    zf-C2H2_8; C2H2-type zinc ribbon
Nucleotide Protein
Heading Accession and Version

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