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LOC9659419 scarecrow-like protein 31 [ Selaginella moellendorffii ]

Gene ID: 9659419, updated on 22-Oct-2023

Summary

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Gene symbol
LOC9659419
Gene description
scarecrow-like protein 31
Locus tag
SELMODRAFT_450177
Gene type
protein coding
RefSeq status
MODEL
Organism
Selaginella moellendorffii
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Lycopodiopsida; Selaginellales; Selaginellaceae; Selaginella
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Genomic context

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See LOC9659419 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
100 current v1.0 (GCF_000143415.4) Unplaced Scaffold NW_003314266.1 (3713193..3719866, complement)

NW_003314266.1Genomic Context describing neighboring genes Neighboring gene scarecrow-like protein 31 Neighboring gene uncharacterized LOC9659415 Neighboring gene scarecrow-like protein 31 Neighboring gene scarecrow-like protein 31 Neighboring gene peroxidase 55-like Neighboring gene PHD finger protein ALFIN-LIKE 4 Neighboring gene short-chain dehydrogenase TIC 32, chloroplastic

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003314266 Unplaced Scaffold Reference v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
scarecrow-like protein 31
Names
GRAS family protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Selaginella moellendorffii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference v1.0

Genomic

  1. NW_003314266.1 Reference v1.0

    Range
    3713193..3719866 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024669585.1 → XP_024525353.1  scarecrow-like protein 31

    UniProtKB/TrEMBL
    D8R161

  2. XM_002965324.2 → XP_002965370.1  scarecrow-like protein 31

    See identical proteins and their annotated locations for XP_002965370.1

    UniProtKB/TrEMBL
    D8R161
    Conserved Domains (1) summary
    pfam03514
    Location:95 → 458
    GRAS; GRAS domain family
Nucleotide Protein
Heading Accession and Version

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