U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC9655533 probable WRKY transcription factor 39 [ Selaginella moellendorffii ]

Gene ID: 9655533, updated on 22-Oct-2023

Summary

Go to the top of the page Help
Gene symbol
LOC9655533
Gene description
probable WRKY transcription factor 39
Locus tag
SELMODRAFT_73220
Gene type
protein coding
RefSeq status
MODEL
Organism
Selaginella moellendorffii
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Lycopodiopsida; Selaginellales; Selaginellaceae; Selaginella
Also known as
WRKY_21
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC9655533 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
100 current v1.0 (GCF_000143415.4) Unplaced Scaffold NW_003314265.1 (205584..208510, complement)

NW_003314265.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112344313 Neighboring gene transfer RNA lysine (anticodon CUU) Neighboring gene programmed cell death protein 4 Neighboring gene stress enhanced protein 2, chloroplastic Neighboring gene leukotriene A-4 hydrolase homolog

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_003314265 Unplaced Scaffold Reference v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
probable WRKY transcription factor 39

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Selaginella moellendorffii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference v1.0

Genomic

  1. NW_003314265.1 Reference v1.0

    Range
    205584..208510 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002964269.2 → XP_002964315.2  probable WRKY transcription factor 39

    Conserved Domains (2) summary
    smart00774
    Location:311 → 368
    WRKY; DNA binding domain
    pfam10533
    Location:272 → 308
    Plant_zn_clust; Plant zinc cluster domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials