U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC9638011 protein SCARECROW [ Selaginella moellendorffii ]

Gene ID: 9638011, updated on 22-Oct-2023

Summary

Go to the top of the page Help
Gene symbol
LOC9638011
Gene description
protein SCARECROW
Locus tag
SELMODRAFT_432115
Gene type
protein coding
RefSeq status
MODEL
Organism
Selaginella moellendorffii
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Lycopodiopsida; Selaginellales; Selaginellaceae; Selaginella
Also known as
SCR1-2
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC9638011 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
100 current v1.0 (GCF_000143415.4) Unplaced Scaffold NW_003314450.1 (92000..94736)

NW_003314450.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC9638286 Neighboring gene serine/threonine-protein kinase STY8 Neighboring gene putative protein TPRXL

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_003314450 Unplaced Scaffold Reference v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
protein SCARECROW

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Selaginella moellendorffii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference v1.0

Genomic

  1. NW_003314450.1 Reference v1.0

    Range
    92000..94736
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002994128.2 → XP_002994174.1  protein SCARECROW

    See identical proteins and their annotated locations for XP_002994174.1

    UniProtKB/TrEMBL
    D8TF12
    Conserved Domains (1) summary
    pfam03514
    Location:415 → 765
    GRAS; GRAS domain family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials